MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
19428wD1_P36
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 72
bases: 2,716,488 bps
CDS: 2,494
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,564
Total number of protein coding genes annotated/found:
2,494
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Items 41 - 60
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5032|JADGLA010000001.1
SEQF5032_00055
Genome Viewer
NA
AA
1215/405
6164-4950
Nucleoside permease NupC
SEQF5032|JADGLA010000001.1
SEQF5032_00056
Genome Viewer
NA
AA
471/157
6313-6783
Transcriptional regulator CtsR
SEQF5032|JADGLA010000001.1
SEQF5032_00057
Genome Viewer
NA
AA
567/189
6802-7368
Protein-arginine kinase activator protein
SEQF5032|JADGLA010000001.1
SEQF5032_00058
Genome Viewer
NA
AA
1011/337
7355-8365
Protein-arginine kinase
SEQF5032|JADGLA010000001.1
SEQF5032_00059
Genome Viewer
NA
AA
2457/819
8379-10835
ATP-dependent Clp protease ATP-binding subunit ClpC
SEQF5032|JADGLA010000001.1
SEQF5032_00060
Genome Viewer
NA
AA
1365/455
11319-12683
DNA repair protein RadA
SEQF5032|JADGLA010000001.1
SEQF5032_00061
Genome Viewer
NA
AA
1074/358
12708-13781
putative PIN and TRAM-domain containing protein YacL
SEQF5032|JADGLA010000001.1
SEQF5032_00062
Genome Viewer
NA
AA
1455/485
14338-15792
Glutamate--tRNA ligase
SEQF5032|JADGLA010000001.1
SEQF5032_00063
Genome Viewer
NA
AA
681/227
16182-16862
Serine acetyltransferase
SEQF5032|JADGLA010000001.1
SEQF5032_00064
Genome Viewer
NA
AA
1401/467
16846-18246
Cysteine--tRNA ligase
SEQF5032|JADGLA010000001.1
SEQF5032_00065
Genome Viewer
NA
AA
405/135
18239-18643
Mini-ribonuclease 3
SEQF5032|JADGLA010000001.1
SEQF5032_00066
Genome Viewer
NA
AA
747/249
18651-19397
Putative TrmH family tRNA/rRNA methyltransferase
SEQF5032|JADGLA010000001.1
SEQF5032_00067
Genome Viewer
NA
AA
525/175
19397-19921
putative protein YacP
SEQF5032|JADGLA010000001.1
SEQF5032_00068
Genome Viewer
NA
AA
570/190
20002-20571
hypothetical protein
SEQF5032|JADGLA010000001.1
SEQF5032_00069
Genome Viewer
NA
AA
183/61
20885-21067
Protein translocase subunit SecE
SEQF5032|JADGLA010000001.1
SEQF5032_00070
Genome Viewer
NA
AA
549/183
21080-21628
Transcription termination/antitermination protein NusG
SEQF5032|JADGLA010000001.1
SEQF5032_00071
Genome Viewer
NA
AA
423/141
21809-22231
50S ribosomal protein L11
SEQF5032|JADGLA010000001.1
SEQF5032_00072
Genome Viewer
NA
AA
693/231
22439-23131
50S ribosomal protein L1
SEQF5032|JADGLA010000001.1
SEQF5032_00073
Genome Viewer
NA
AA
501/167
23403-23903
50S ribosomal protein L10
SEQF5032|JADGLA010000001.1
SEQF5032_00074
Genome Viewer
NA
AA
369/123
23946-24314
50S ribosomal protein L7/L12
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Items 41 - 60
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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